dbCAN-seq: a database of CAZyme sequence and annotation

Gene clsuter ID: MGYG000003253_148|CGC1
Gene ID: MGYG000003253_01573
Location and strand information: 12452 - 14455 (+)
Family: GH78
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 4.628
Protein molecular weight: 76339.54
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000003253_148|CGC1
Gene ID: MGYG000003253_01574
Location and strand information: 14456 - 15556 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000003253_148|CGC1
Gene ID: MGYG000003253_01575
Location and strand information: 15576 - 16436 (+)
Family: HTH_AraC+HTH_AraC
Protein type: TF
Protein description: HTH-type transcriptional activator RhaR

Gene clsuter ID: MGYG000003253_148|CGC1
Gene ID: MGYG000003253_01576
Location and strand information: 16414 - 17955 (+)
Family: 3.A.1.1.10
Protein type: TC
Protein description: hypothetical protein

Gene clsuter ID: MGYG000003253_148|CGC1
Gene ID: MGYG000003253_01577
Location and strand information: 17971 - 18864 (+)
Family: 3.A.1.1.29
Protein type: TC
Protein description: Inner membrane ABC transporter permease protein YcjP

You are here: cgc-> ?help

CGC gene composition diagram

Gene composition table

Genomic location

Protein ID	Protein Name	Type	Start	End	Strand	Signature
MGYG000003253_01573	hypothetical protein	CAZyme	12452	14455	+	GH78
MGYG000003253_01574	hypothetical protein	null	14456	15556	+	URO-D
MGYG000003253_01575	HTH-type transcriptional activator RhaR	TF	15576	16436	+	HTH_AraC+HTH_AraC
MGYG000003253_01576	hypothetical protein	TC	16414	17955	+	3.A.1.1.10
MGYG000003253_01577	Inner membrane ABC transporter permease protein YcjP	TC	17971	18864	+	3.A.1.1.29
Protein ID	Protein Name	Type	Start	End	Strand	Signature